BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014H02SP1|AL426744
(743 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1281 1052 0.0
3x_Contig748 262 8e-70
>3x_Contig1281
Length = 7825
Score = 1052 bits (530), Expect = 0.0
Identities = 530/530 (100%)
Strand = Plus / Plus
Query: 1 atccctaagcttgtcctttgctttgattggggatggagaagcgtcttttctttcgtcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7296 atccctaagcttgtcctttgctttgattggggatggagaagcgtcttttctttcgtcagg 7355
Query: 61 gcctcttaattctagtaataaattccttgctctatctgcagggtcttgttttgatgacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7356 gcctcttaattctagtaataaattccttgctctatctgcagggtcttgttttgatgacga 7415
Query: 121 caagctttcagtttcaggaaggctggccgattttttagcagtaggcgattcggtaagcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7416 caagctttcagtttcaggaaggctggccgattttttagcagtaggcgattcggtaagcgt 7475
Query: 181 tctattttgttccacgaaagcttcgatagtactatcagcagtgatgttatcaaaaattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7476 tctattttgttccacgaaagcttcgatagtactatcagcagtgatgttatcaaaaattga 7535
Query: 241 tgccccggatttaccatctagtaatttctttctagccaatgcacgtttacgagtactaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7536 tgccccggatttaccatctagtaatttctttctagccaatgcacgtttacgagtactaga 7595
Query: 301 tggatctccttttgaaggagctgcatttttcaatttatccaaaagcttctctatatcgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7596 tggatctccttttgaaggagctgcatttttcaatttatccaaaagcttctctatatcgtc 7655
Query: 361 cctatcatcagacggttcttgcgaagtgcttaaattttttgctgttgccttactatctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7656 cctatcatcagacggttcttgcgaagtgcttaaattttttgctgttgccttactatctgc 7715
Query: 421 ctcctgttgtttccgttgttgatcttcaatcattttctttctcctttcgtaagcacgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7716 ctcctgttgtttccgttgttgatcttcaatcattttctttctcctttcgtaagcacgttc 7775
Query: 481 ttcttcttccagtttgacattatgagttttagctttcttgaattcggtaa 530
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7776 ttcttcttccagtttgacattatgagttttagctttcttgaattcggtaa 7825
>3x_Contig748
Length = 2621
Score = 262 bits (132), Expect = 8e-70
Identities = 136/138 (98%)
Strand = Plus / Minus
Query: 606 gattttcaaattccagcaaacttaatttgatttcatcgcttagaagatcagctttctttc 665
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2621 gattttgaaattccagcaaacttaatttgatttcatcgcttagaagatcagctttctttc 2562
Query: 666 tagcttcaggtaaaaccggtackaccttatttaaaacacgatctaacggatggaatttag 725
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2561 tagcttcaggtaaaaccggtactaccttatttaaaacacgatctaacggatggaatttag 2502
Query: 726 aagggtcacttaggtttc 743
||||||||||||||||||
Sbjct: 2501 aagggtcacttaggtttc 2484
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7336
Number of Sequences: 1807
Number of extensions: 7336
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 2
length of query: 743
length of database: 10,358,551
effective HSP length: 16
effective length of query: 727
effective length of database: 10,329,639
effective search space: 7509647553
effective search space used: 7509647553
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)